{"id":44360,"date":"2026-08-04T16:14:21","date_gmt":"2026-08-04T12:14:21","guid":{"rendered":"https:\/\/dnagtx.com\/?p=44360"},"modified":"2026-09-25T12:36:41","modified_gmt":"2026-09-25T08:36:41","slug":"dr-gustavo-de-souza","status":"publish","type":"post","link":"https:\/\/dnagtx.com\/portuguese\/dr-gustavo-de-souza\/","title":{"rendered":"Dr. Gustavo de Souza"},"content":{"rendered":"\t\t<div data-elementor-type=\"wp-post\" data-elementor-id=\"44360\" class=\"elementor elementor-44360\" data-elementor-post-type=\"post\">\n\t\t\t\t<div class=\"has_eae_slider elementor-element elementor-element-ce77f8b e-flex e-con-boxed e-con e-parent\" data-eae-slider=\"64509\" data-id=\"ce77f8b\" data-element_type=\"container\" data-e-type=\"container\">\n\t\t\t\t\t<div class=\"e-con-inner\">\n\t\t<div class=\"has_eae_slider elementor-element elementor-element-bd60dc9 e-con-full e-flex e-con e-child\" data-eae-slider=\"57060\" data-id=\"bd60dc9\" data-element_type=\"container\" data-e-type=\"container\">\n\t\t\t\t<div class=\"elementor-element elementor-element-4f0b7e9 elementor-widget elementor-widget-image\" data-id=\"4f0b7e9\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"image.default\">\n\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<img fetchpriority=\"high\" decoding=\"async\" width=\"799\" height=\"817\" src=\"https:\/\/dnagtx.com\/wp-content\/uploads\/2026\/02\/Dr.-Gustavo-de-Souza.webp\" class=\"attachment-full size-full wp-image-41186\" alt=\"\" srcset=\"https:\/\/dnagtx.com\/wp-content\/uploads\/2026\/02\/Dr.-Gustavo-de-Souza.webp 799w, https:\/\/dnagtx.com\/wp-content\/uploads\/2026\/02\/Dr.-Gustavo-de-Souza-293x300.webp 293w, https:\/\/dnagtx.com\/wp-content\/uploads\/2026\/02\/Dr.-Gustavo-de-Souza-768x785.webp 768w\" sizes=\"(max-width: 799px) 100vw, 799px\" \/>\t\t\t\t\t\t\t\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-c8148da elementor-widget elementor-widget-heading\" data-id=\"c8148da\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">Dr. Gustavo de Souza<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-7ce86df elementor-widget elementor-widget-heading\" data-id=\"7ce86df\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">Director of Bioinformatics<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-aeb7f65 elementor-align-center elementor-icon-list--layout-traditional elementor-list-item-link-full_width elementor-widget elementor-widget-icon-list\" data-id=\"aeb7f65\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"icon-list.default\">\n\t\t\t\t\t\t\t<ul class=\"elementor-icon-list-items\">\n\t\t\t\t\t\t\t<li class=\"elementor-icon-list-item\">\n\t\t\t\t\t\t\t\t\t\t\t<a href=\"https:\/\/www.linkedin.com\/in\/gustavo-souza-b8880585?utm_source=share&#038;utm_campaign=share_via&#038;utm_content=profile&#038;utm_medium=android_app\">\n\n\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-icon-list-icon\">\n\t\t\t\t\t\t\t<svg aria-hidden=\"true\" class=\"e-font-icon-svg e-fab-linkedin\" viewBox=\"0 0 448 512\" xmlns=\"http:\/\/www.w3.org\/2000\/svg\"><path d=\"M416 32H31.9C14.3 32 0 46.5 0 64.3v383.4C0 465.5 14.3 480 31.9 480H416c17.6 0 32-14.5 32-32.3V64.3c0-17.8-14.4-32.3-32-32.3zM135.4 416H69V202.2h66.5V416zm-33.2-243c-21.3 0-38.5-17.3-38.5-38.5S80.9 96 102.2 96c21.2 0 38.5 17.3 38.5 38.5 0 21.3-17.2 38.5-38.5 38.5zm282.1 243h-66.4V312c0-24.8-.5-56.7-34.5-56.7-34.6 0-39.9 27-39.9 54.9V416h-66.4V202.2h63.7v29.2h.9c8.9-16.8 30.6-34.5 62.9-34.5 67.2 0 79.7 44.3 79.7 101.9V416z\"><\/path><\/svg>\t\t\t\t\t\t<\/span>\n\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-icon-list-text\">LinkedIn Profile<\/span>\n\t\t\t\t\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t<\/li>\n\t\t\t\t\t\t<\/ul>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-05400cb elementor-widget elementor-widget-n-accordion\" data-id=\"05400cb\" data-element_type=\"widget\" data-e-type=\"widget\" data-settings=\"{&quot;default_state&quot;:&quot;all_collapsed&quot;,&quot;max_items_expended&quot;:&quot;one&quot;,&quot;n_accordion_animation_duration&quot;:{&quot;unit&quot;:&quot;ms&quot;,&quot;size&quot;:400,&quot;sizes&quot;:[]}}\" data-widget_type=\"nested-accordion.default\">\n\t\t\t\t\t\t\t<div class=\"e-n-accordion\" aria-label=\"Accordion. Open links with Enter or Space, close with Escape, and navigate with Arrow Keys\">\n\t\t\t\t\t\t<details id=\"e-n-accordion-item-5500\" class=\"e-n-accordion-item\" >\n\t\t\t\t<summary class=\"e-n-accordion-item-title\" data-accordion-index=\"1\" tabindex=\"0\" aria-expanded=\"false\" aria-controls=\"e-n-accordion-item-5500\" >\n\t\t\t\t\t<span class='e-n-accordion-item-title-header'><div class=\"e-n-accordion-item-title-text\"> View Profile <\/div><\/span>\n\t\t\t\t\t\t\t<span class='e-n-accordion-item-title-icon'>\n\t\t\t<span class='e-opened' ><i aria-hidden=\"true\" class=\"icon icon-up-arrow1\"><\/i><\/span>\n\t\t\t<span class='e-closed'><i aria-hidden=\"true\" class=\"icon icon-down-arrow1\"><\/i><\/span>\n\t\t<\/span>\n\n\t\t\t\t\t\t<\/summary>\n\t\t\t\t<div class=\"has_eae_slider elementor-element elementor-element-5df673f e-con-full e-flex e-con e-child\" data-eae-slider=\"69095\" role=\"region\" aria-labelledby=\"e-n-accordion-item-5500\" data-id=\"5df673f\" data-element_type=\"container\" data-e-type=\"container\" data-settings=\"{&quot;background_background&quot;:&quot;classic&quot;}\">\n\t\t\t\t<div class=\"elementor-element elementor-element-b900ba7 elementor-widget__width-initial elementor-widget elementor-widget-heading\" data-id=\"b900ba7\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">Dr. de Souza is the Head of Proteomics at DNA GTx who brings advanced proteomics perspective, supporting the integration of protein-level data with broader research and discovery efforts. His advisory role helps ensure cohesive, high-confidence scientific outcomes.<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/details>\n\t\t\t\t\t\t<details id=\"e-n-accordion-item-5501\" class=\"e-n-accordion-item\" >\n\t\t\t\t<summary class=\"e-n-accordion-item-title\" data-accordion-index=\"2\" tabindex=\"-1\" aria-expanded=\"false\" aria-controls=\"e-n-accordion-item-5501\" >\n\t\t\t\t\t<span class='e-n-accordion-item-title-header'><div class=\"e-n-accordion-item-title-text\"> Publications <\/div><\/span>\n\t\t\t\t\t\t\t<span class='e-n-accordion-item-title-icon'>\n\t\t\t<span class='e-opened' ><i aria-hidden=\"true\" class=\"icon icon-up-arrow1\"><\/i><\/span>\n\t\t\t<span class='e-closed'><i aria-hidden=\"true\" class=\"icon icon-down-arrow1\"><\/i><\/span>\n\t\t<\/span>\n\n\t\t\t\t\t\t<\/summary>\n\t\t\t\t<div class=\"has_eae_slider elementor-element elementor-element-3b1ddbb e-flex e-con-boxed e-con e-child\" data-eae-slider=\"26439\" role=\"region\" aria-labelledby=\"e-n-accordion-item-5501\" data-id=\"3b1ddbb\" data-element_type=\"container\" data-e-type=\"container\" data-settings=\"{&quot;background_background&quot;:&quot;classic&quot;}\">\n\t\t\t\t\t<div class=\"e-con-inner\">\n\t\t\t\t<div class=\"elementor-element elementor-element-517c26a elementor-widget elementor-widget-text-editor\" data-id=\"517c26a\" data-element_type=\"widget\" data-e-type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t\t\t\t\t\t<ol><li>Pereira D.C.B.G., Cavalcante J.V.F., Cavalcanti L.F., Falcao R.M., de Souza J.E.S., Dalmolin R.J.S., Rego T.G., Mangul S., de Souza G.A., Terramate P. &amp; Lima J.P.M.S. CaRinDB: An integrated database of common cancer mutations and residue interaction network parameters. <em>Bioinformatics Advances 6, <\/em><br \/><a href=\"https:\/\/academic.oup.com\/bioinformaticsadvances\/article\/6\/1\/vbaf313\/8440752\">https:\/\/academic.oup.com\/bioinformaticsadvances\/article\/6\/1\/vbaf313\/8440752<\/a><\/li><li>Gon\u00e7alves A.C.A., Nunes T.M.D., Parize E., Gerhardt E.C.M., de Souza G.A., Scholl J., Forchhammer K. &amp; Huergo, L.F. The activity of the ribonucleotide monophosphatase UmpH is controlled by interaction with the GlnK signaling protein in <em>Escherichia coli<\/em>. <em>J Biol Chem 300<\/em>, 107931, 2024.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0021925824024335\">https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0021925824024335<\/a><\/li><li>Machado K.C.T., Fiuza T.S., de Souza S.J. &amp; de Souza G.A. Detecting predicted cancer-testis antigens in proteomics datasets of healthy and tumoral samples. <em>IEEE Access 12<\/em>, 150930-150939, 2024.<br \/><a href=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/10709354\">https:\/\/ieeexplore.ieee.org\/abstract\/document\/10709354<\/a><\/li><li>Dahlberg D., Holm S., Sagen E.M.L., Michelsen A.E., Stensland M.E., de Souza G.A., Muller E.G., Connely J.P., Revheim M-E., Halvorsen B. &amp; Hassel B. Bacterial brain abscesses expand despite effective antibiotic treatment: a process powered by osmosis due to neutrophil cell death. <em>Neurosurgery 94<\/em>, 1079-1087, 2024.<br \/><a href=\"https:\/\/journals.lww.com\/neurosurgery\/fulltext\/2024\/05000\/bacterial_brain_abscesses_expand_despite_effective.22.aspx\">https:\/\/journals.lww.com\/neurosurgery\/fulltext\/2024\/05000\/bacterial_brain_abscesses_expand_despite_effective.22.aspx<\/a><\/li><li>Dahlberg D., Holm S., Sagen E.M.L., Michelsen A.E., Stensland M.E., de Souza G.A., Halvorsen B. &amp; Hassel B. Neutrophil cell death (NETosis) drives bacterial brain abscesses growth. <em>Brain and Spine 3<\/em>, 102317, 2023.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S2772529423006057\">https:\/\/www.sciencedirect.com\/science\/article\/pii\/S2772529423006057<\/a><\/li><li>Falcao R.M., Kokaraki G., de Wispelaere W., Amant F., de Souza G.A., de Souza J.E.S., Carlson J.W. &amp; Petta T.B. The expression of the immunoproteasome subunit PSMB9 is related to distinct molecular subtypes of uterine leiomyosarcoma. <em>Cancers 14<\/em>, 5007, 2022.<br \/><a href=\"https:\/\/www.mdpi.com\/2072-6694\/14\/20\/5007\">https:\/\/www.mdpi.com\/2072-6694\/14\/20\/5007<\/a><\/li><li>da Cunha L.M., Terramate P., Fiuza T.S., da Silva V.L., Kroll J.E., de Souza S.J. &amp; de Souza G.A. dbPepVar: a novel cancer proteogenomics database. <em>IEEE Access 10, <\/em>90982-90994, 2022.<br \/><a href=\"https:\/\/ieeexplore.ieee.org\/abstract\/document\/9867999\">https:\/\/ieeexplore.ieee.org\/abstract\/document\/9867999<\/a><br \/>\\<\/li><li>Dahlberg D., Rummel J., Distante S., de Souza G.A., Stensland M.E., Mariussen E., Rootwelt H., Voie O. &amp; Hassel B. Glioblastoma microenvironment contains multiple hormonal and non-hormonal growth-stimulating factors. <em>Fluids Barriers CNS 19<\/em>, 45, 2022.<br \/><a href=\"https:\/\/link.springer.com\/article\/10.1186\/s12987-022-00333-z\">https:\/\/link.springer.com\/article\/10.1186\/s12987-022-00333-z<\/a><\/li><li>Gravina F., Degaut F.L., Gerhardt E.C.M., Pedrosa F.O., Souza E.M., de Souza G.A. &amp; Huergo L.F. The protein-protein interaction network of the <em>Escherichia coli<\/em> EIIANtr regulatory protein reveals a role in cell motility and metabolic control. <em>Res Microbiol 172<\/em>, 103882, 2021.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0923250821000966\">https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0923250821000966<\/a><\/li><li>Ramberg H., Richardson E., de Souza G.A., Rakaee M., Stensland M.E., Braadland P.R., Nygard S., Ogren O., Guldvik I.J., Berge V., Svindland A., Tasken K.A. &amp; Andersen S. Proteomic analyses identify major vault protein as a prognostic biomarker for fatal prostate cancer. <em>Carcinogenesis 42<\/em>, 685-693, 2021.<br \/><a href=\"https:\/\/academic.oup.com\/carcin\/article\/42\/5\/685\/6145758\">https:\/\/academic.oup.com\/carcin\/article\/42\/5\/685\/6145758<\/a><\/li><li>Thome C.H., Ferreira G.A., Pereira-Martins D.A., dos Santos G.A., Almeida-Silveira D.R., Weinhauser I., de Souza G.A., Houtsma R., Schuringa J.J., Rego E.M. &amp; Fa\u00e7a V.M. The expression of NTAL and its protein interactors is associated with clinical outcomes in acute myeloid leucemia. <em>Mol Cell Proteomics 20<\/em>, 2021.<br \/><a href=\"https:\/\/www.mcponline.org\/article\/S1535-9476(21)00064-5\/fulltext\">https:\/\/www.mcponline.org\/article\/S1535-9476(21)00064-5\/fulltext<\/a><\/li><li>Gerhardt E.C.M., Parize E., Gravina F., Pontes F.L.D., Santos A.R.S., Araujo G.A.T., Goedert A.C., Urbanski A.H., Steffens M.B.R., Chubatsu L.S., Pedrosa F.O., Souza E.M., Forchhammer K., Ganusova E., Alexandre G., de Souza G.A. &amp; Huergo L.F. The protein-protein interaction network reveals a novel role of the signal transduction protein PII in the control of c-di-GMP homeostasis in <em>Azospirillum brasilense<\/em>. <em>Msystems 5<\/em>, 817-820, 2020.<br \/><a href=\"https:\/\/journals.asm.org\/doi\/full\/10.1128\/msystems.00817-20\">https:\/\/journals.asm.org\/doi\/full\/10.1128\/msystems.00817-20<\/a><\/li><li>Fiuza T.S., Lima J.P.M.S. &amp; de Souza G.A. EpitoCore: mining conserved epitope vaccine candidates in the core proteome of multiple bacteria strains. <em>Front Immunol 11<\/em>, 816, 2020.<br \/><a href=\"https:\/\/www.frontiersin.org\/journals\/immunology\/articles\/10.3389\/fimmu.2020.00816\/full\">https:\/\/www.frontiersin.org\/journals\/immunology\/articles\/10.3389\/fimmu.2020.00816\/full<\/a><\/li><li>Santos A.R.S., Gerhardt E.C.M., Parize E., Pedrosa F.O., Steffens M.B.R., Chubatsu L.S., Souza E.M., Passaglia L.M.P., Sant\u2019anna F.H., de Souza G.A., Huergo L.F. &amp; Forchhammer K. NAD+ biosynthesis in bacteria is controlled by global carbon\/nitrogen levels via PII signaling. <em>J Biol Chem 295<\/em>, 6165-6176, 2020.<br \/><a href=\"https:\/\/www.jbc.org\/article\/S0021-9258(17)48243-3\/fulltext\">https:\/\/www.jbc.org\/article\/S0021-9258(17)48243-3\/fulltext<\/a><\/li><li>Kukolj C., Pedrosa F.O., de Souza G.A., Summer L.W., Lei Z., Sumner B., do Amaral F.P., Juexin W., Trupti J., Huergo L.F., Monteiro R.A., Valdameri G., Stacey G. &amp; de Souza E.M. Proteomic and metabolomic analysis of <em>Azospirillum brasilense <\/em>ntrC mutante under high and low nitrogen conditions. <em>J Prot Res 19<\/em>, 92-105, 2019.<br \/><a href=\"https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/acs.jproteome.9b00397\">https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/acs.jproteome.9b00397<\/a><\/li><li>Tomescu-Baciu A., Johansen J.N., Holmoy T., Greiff V., Stensland M.E., de Souza G.A., Vartdal F. &amp; Lossius A. Persistence of intrathecal oligoclonal B cells and IgG in multiple sclerosis. <em>J Immunol 333<\/em>, 576966, 2019.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S0165572819301894\">https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S0165572819301894<\/a><\/li><li>Machado K.C.T., Fortuin S., Tomazella G.G., Fonseca A.F., Warren R.M., Wiker H.G., de Souza S.J. &amp; de Souza G.A. On the impact of the pangenome and annotation discrepancies while building protein sequence databases for bacterial proteogenomics. <em>Front Microbiology 10, <\/em>1410, 2019.<br \/><a href=\"https:\/\/www.frontiersin.org\/journals\/microbiology\/articles\/10.3389\/fmicb.2019.01410\/full\">https:\/\/www.frontiersin.org\/journals\/microbiology\/articles\/10.3389\/fmicb.2019.01410\/full<\/a><\/li><li>Mathiesen S.B., Lunde M., Aronsen J.M., Romaine A., Kaupang A., Martinsen M., de Souza G.A., Nyman T.A., Sjaastad I., Christensen G. &amp; Carlson C.R. The cardiac syndecan-4 interactome reveals a role for syndecan-4 in nluclear translocation of muscle LIM protein (MLP). <em>J Biol Chem 294<\/em>, 8717-8731, 2019.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S002192582036395X\">https:\/\/www.sciencedirect.com\/science\/article\/pii\/S002192582036395X<\/a><\/li><li>Sikorski K., Mehta A., Inngjerdingen M., Thakor F., Kling S., Kalina T., Nyman T.A., Stensland M.E., Zhou W., de Souza G.A., Holden L., Stuchly J., Templin M. &amp; Lund-Johansen F. A high-throughput pipeline for validation of antibodies. <em>Nature Methods 15<\/em>, 909-912, 2018.<br \/><a href=\"https:\/\/www.nature.com\/articles\/s41592-018-0179-8\">https:\/\/www.nature.com\/articles\/s41592-018-0179-8<\/a><\/li><li>Tutturen A.E.V., Dorum S., Clancy T., Reims H.M., Christophersen A., Lundin K.E.A., Sollid L.M., de Souza G.A. &amp; Stamnaes J. Characterization of the small intestinal lesion in celiac disease by label-free quantitative mass spectrometry. <em>The Am Journal of Pathology 188<\/em>, 1563-1579, 2018.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0002944017309173\">https:\/\/www.sciencedirect.com\/science\/article\/pii\/S0002944017309173<\/a><\/li><li>Kostas M., Haugsten E.M., Zhen Y., Sorensen V., Szybowska P., Fiorito E., Lorenz S., Jones N., de Souza G.A., Wiedlocha A. &amp; Wesche J. Protein tyrosine phosphatase receptor type G (PTPRG) controls fibroblast growth factor receptor (FGFR) 1 activity and influences sensitivity to FGFR kinase inhibitors. <em>Mol Cell Proteomics 17<\/em>, 850-870, 2018.<br \/><a href=\"https:\/\/www.mcponline.org\/article\/S1535-9476(20)32463-4\/fulltext\">https:\/\/www.mcponline.org\/article\/S1535-9476(20)32463-4\/fulltext<\/a><\/li><li>Gravina F., Sanchuki H.S., Rodrigues T.E., Gerhardt E.C.M., Pedrosa F.O., Souza E.M., Valdameri G., de Souza G.A. &amp; Huergo L.F. Proteome analysis of an <em>Escherichia coli<\/em> ptsN-null strain under different nitrogen regimes. <em>J Proteomics 174<\/em>, 28-35, 2018. <br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S1874391917304293\">https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S1874391917304293<\/a><\/li><li>Shao W., Pedrioli P.G.A., Wolski W., Scurtescu C., Schmid E., Vizcaino J.A., Courcelles M., Schuster H., Kowalewski D., Marino F., Arlehamn C.S.L., Vaughan K., Peters B., Sette A., Ottenhoff T.H.M., Meijgaarden K.E., Nieuwenhuizen N., Kaufmann S.H.E., Schlapbach R., Castle J.C., Nesvizhskii A.I., Nielsen M., Deutsch E.W., Campbell D.S., Moritz R.L., Zubarev R.A., Ytterberg A.J., Purcell A.W., Marcilla M., Paradela A., Wang Q., Costello C.E., Ternette N., van Veelen P.A., van Els C.A.C.M., Heck A.J.R., de Souza G.A., Sollid L.S., Admon A., Stevanovic S., Rammensee H.G., Thibault P., Perreault C., Bassani-Stenberg M., Aebersold R. &amp; Caron E. The SysteMHC atlas project. <em>Nucleic Acids Res<\/em> <em>46<\/em>, D1237-D1243, 2018.<br \/><a href=\"https:\/\/academic.oup.com\/nar\/article\/46\/D1\/D1237\/4056238\">https:\/\/academic.oup.com\/nar\/article\/46\/D1\/D1237\/4056238<\/a><\/li><li>da Silva V.L., Fonseca A.F., da Silva T.E., Coelho A.C., Kroll J.E., de Souza J.E.S., Stranski B., de Souza G.A. &amp; de Souza S.J. Genome-wide identification of cancer\/testis genes and their association with prognosis in a pan-cancer analysis. <em>Oncotarget 8, <\/em>92966-92977, 2017.<br \/><a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC5696236\/\">https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC5696236\/<\/a><\/li><li>Hassel B., de Souza G.A., Stensland M.E., Ivanovic J., Voie O. &amp; Dahlberg D. The proteome of pus from human brain abscesses: host-derived neurotoxic proteins and the cell type diversity of the CNS pus. <em>J Neurosurgery 1<\/em>, 829-837, 2017.<br \/><a href=\"https:\/\/thejns.org\/view\/journals\/j-neurosurg\/129\/3\/article-p829.xml\">https:\/\/thejns.org\/view\/journals\/j-neurosurg\/129\/3\/article-p829.xml<\/a><\/li><li>Iversen R., Snir O., Stensland M., Kroll J.E., Steinsbo O., Korponay-Szabo I.R., Lundin K.E.A., de Souza G.A. &amp; Sollid L.M. Strong clonal relatedness between serum and gut IgA despite different plasma cell origins. <em>Cell Reports 20,<\/em> 2357-2367, 2017.<br \/><a href=\"https:\/\/www.cell.com\/cell-reports\/fulltext\/S2211-1247(17)31143-9\">https:\/\/www.cell.com\/cell-reports\/fulltext\/S2211-1247(17)31143-9<\/a><\/li><li>Havfer T.L., Wanichawan P., Manfra O., de Souza G.A., Lunde M., Martinsen M., Louch W.E., Sejersted O.M. &amp; Carlson C.R. Mapping the in vitro interactome of cardiac sodium (Na+) \u2013 calcium (Ca2+) exchanger 1 (NCX1). <em>Proteomics 17<\/em>, 2017.<br \/><a href=\"https:\/\/analyticalsciencejournals.onlinelibrary.wiley.com\/doi\/abs\/10.1002\/pmic.201600417\">https:\/\/analyticalsciencejournals.onlinelibrary.wiley.com\/doi\/abs\/10.1002\/pmic.201600417<\/a><\/li><li>Kroll J.E., da Silva V.L., de Souza S.J. &amp; de Souza G.A. A tool for integrating genetic and mass spectrometry-based peptide data: Proteogenomics Viewer. <em>Bioessays 39<\/em>, 2017.<br \/><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/abs\/10.1002\/bies.201700015\">https:\/\/onlinelibrary.wiley.com\/doi\/abs\/10.1002\/bies.201700015<\/a><\/li><li>Tortelli Jr T.C., de Godoy L.M.F., de souza G.A., Bonatto D., Otake A.H., de Freitas Saito R., Rosa J.C., Greene L.J. &amp; Chammas R. Accumulation of prohibitin is a common cellular response to different stressing stimuli and protects melanoma cells from ER stress and chemotherapy-induced cell death. <em>Oncotarget 8<\/em>, 43114-43129, 2017.<br \/><a href=\"https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC5522132\/\">https:\/\/pmc.ncbi.nlm.nih.gov\/articles\/PMC5522132\/<\/a><\/li><li>Sanchuki H.B., Gravina F., Rodrigues T.E., Gerhardt E.C., Pedrosa F.O., Souza E.M., Raittz R.T., Valdameri G., de Souza G.A. &amp; Huergo, L.F. Dynamics of the Escherichia coli proteome in response to nitrogen starvation and entry into the stationary phase. <em>Biochim Biophys Acta 1865<\/em>, 344-352, 2017.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S1570963916302564\">https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S1570963916302564<\/a><\/li><li>Rowczenio D., Stensland M., de Souza G.A., Strom E.H., Gilbertson J.A., Taylor G., Rendell N., Minogue S., Efebera Y.A., Lachmann H.J., Wechalekar A.D., Hawkins P.N., Heimdal K.R., Selvig K., Laegreid I.K., Gilmore J.D &amp; Wien T.N. Renal amyloidosis associated with five novel variants in the fibrinogen A-alpha chain protein. <em>Kidney Int Rep 2<\/em>, 461-469, 2017.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S246802491630170X\">https:\/\/www.sciencedirect.com\/science\/article\/pii\/S246802491630170X<\/a><\/li><li>Paiva A.L.S., Oliveira J.T.A., de Souza G.A. &amp; Vasconcelos I.M. Label-free proteomics reveal that Cowpea Severe Mosaic Virus trasiently suppresses the host leaf protein accumulation during the compatible interaction with cowpea (Vigna unguiculata [L] Walp.). <em>J Prot Res 15,<\/em> 4208-4220, 2016.<br \/><a href=\"https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/acs.jproteome.6b00211\">https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/acs.jproteome.6b00211<\/a><\/li><li>Haugsten E.M., Sorensen V., Bosakova M.K., de Souza G.A., Krekci P., Wiedlocha A. &amp; Wesche J. Proximity labeling reveals molecular determinants of FGFR4 endosomal transport. <em>J Prot Res 15<\/em>, 3841-3855, 2016.<br \/><a href=\"https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/acs.jproteome.6b00652\">https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/acs.jproteome.6b00652<\/a><\/li><li>Vasilevska J., de Souza G.A., Stensland M., Skrastina D., Zhulenvovs D., Paplausks R., Kurena B., Kozlovska T. &amp; Zajakina A. Comparative protein profiling of B16 mouse melanoma cells susceptible and non-susceptible to alphavirus infection: effect of the tumor microenvironment. <em>Cancer Biol &amp; Ther 10<\/em>, 1035-1050, 2016.<br \/><a href=\"https:\/\/www.tandfonline.com\/doi\/full\/10.1080\/15384047.2016.1219813\">https:\/\/www.tandfonline.com\/doi\/full\/10.1080\/15384047.2016.1219813<\/a><\/li><li>Karlsen T., de Souza G.A., Odegaard B., Engebretsen L. &amp; Brinchmann J. microRNA-140 inhibits inflammation and stimulates chondrogenesis in a model of interleukin-1 beta-induced osteoarthrites. <em>Mol Ther Nucleic Acids 5, <\/em>e373, 2016.<br \/><a href=\"https:\/\/www.cell.com\/molecular-therapy-family\/nucleic-acids\/fulltext\/S2162-2531(17)30084-7\">https:\/\/www.cell.com\/molecular-therapy-family\/nucleic-acids\/fulltext\/S2162-2531(17)30084-7<\/a><\/li><li>Lund-Johansen F., Carrillo D.R., Mehta A., Sikorski K., Inngjerdingen M., Kalina T., Roysland K., de Souza G.A., Bradbury A., Lacrevisse Q. &amp; Stuchly A. MetaMass, a tool for meta-analysis of subcellular proteomics data. <em>Nature Methods 13<\/em>, 837-840, 2016.<br \/><a href=\"https:\/\/www.nature.com\/articles\/nmeth.3967\">https:\/\/www.nature.com\/articles\/nmeth.3967<\/a><\/li><li>Dorum S., Steinsbo O., Bergseng E., Arntzen M.O., de Souza G.A. &amp; Sollid L.M. Gluten-specific antibodies of celiac disease gut plasma cells recognize long proteolytic fragments that typically harbor T-cell epitopes. <em>Sci Rep 6, <\/em>25565, 2016<em>.<\/em><br \/><a href=\"https:\/\/www.nature.com\/articles\/srep25565\">https:\/\/www.nature.com\/articles\/srep25565<\/a><\/li><li>Riaz T., Sollid L.M., Olsen I. &amp; de Souza G.A. Quantitative Proteomics of gut-derived Th1 and Th1\/Th17 clones reveal the presence of CD28+ NKG2D- Th1 cytotoxic CD4+ T cells. <em>Mol Cell Proteomics 15<\/em>, 1007-1016, 2016.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1535947620336574\">https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1535947620336574<\/a><\/li><li>Kalayou S., Granum C., Berntsen H.F., Groseth P.K., Verhaegen S., Conolly S., Brandt I., de Souza G.A. &amp; Ropstad, E. Label-free based quantitative proteomics analysis of primary neonatal porcine Leydig cells exposed to the persistent contaminant 3-methylsulfonyl-DDE. <em>J Proteomics 137<\/em>, 68-82, 2016.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S1874391915302062\">https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S1874391915302062<\/a><\/li><li>Camassa L.M.A., Lunde L.K., Hoddevik E.H., Stensland M., Boldt H.B., de Souza G.A., Ottersen O.P. &amp; Amiry-Moghaddam M. Mechanisms underlying AQP4 accumulation in astrocyte endfeet. <em>GLIA 63<\/em>, 2073-2091, 2015.<br \/><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/abs\/10.1002\/glia.22878\">https:\/\/onlinelibrary.wiley.com\/doi\/abs\/10.1002\/glia.22878<\/a><\/li><li>Johansen J.N., Vartdal F., Desmarais C., Tutturen A.E.V., de Souza G.A., Lossius A. &amp; Holm\u00f8y T. Intrathecal BCR transcriptome in multiple sclerosis versus other neuroinflammation: Equally diverse and compartmentalized, but more mutated, biased and overlapping with the proteome. <em>Clin Immunol 160<\/em>, 211-225, 2015.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S152166161500203X\">https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S152166161500203X<\/a><\/li><li>Fortuin S., Tomazella G.G., Nagayaryan N., Sampson S., van Pittius N.G., Soares N.C., Wiker H.G., Warren R.M. &amp; de Souza G.A. Phosphoproteomic analysis of a clinical <em>Mycobacterium tuberculosis<\/em> Beijing isolate: Expanding the mycobacterial phosphoproteome catalogue. <em>Front Microbiol<\/em>o<em>gy<\/em> <em>6, <\/em>1-17, 2015.<br \/><a href=\"https:\/\/www.frontiersin.org\/journals\/microbiology\/articles\/10.3389\/fmicb.2015.00006\/full\">https:\/\/www.frontiersin.org\/journals\/microbiology\/articles\/10.3389\/fmicb.2015.00006\/full<\/a><\/li><li>Bergseng E., Dorum S., Arntzen M.\u00d8., Nielsen M., Nygard S., Buus S., de Souza G.A. &amp; Sollid L.M. Different binding motifs of the celiac disease associated HLA molecules DQ2.5, DQ2.2 and DQ7.5 revealed by relative quantitative proteomics of endogenous peptide repertoires. <em>Immunogenetics 67<\/em>, 73-84, 2015.<br \/><a href=\"https:\/\/link.springer.com\/article\/10.1007\/s00251-014-0819-9\">https:\/\/link.springer.com\/article\/10.1007\/s00251-014-0819-9<\/a><\/li><li>Kroll J.E., de Souza S.J. &amp; de Souza G.A. Identification of rare alternative splicing events in MS\/MS data reveals a significant fraction of alternative translation initiation sites. <em>PeerJ e673<\/em>, 2014.<br \/><a href=\"https:\/\/peerj.com\/articles\/673\/\">https:\/\/peerj.com\/articles\/673\/<\/a><\/li><li>Dorum S., Bodd M., Fallang L-E., Bergseng E., Stamnaes J., de Souza G.A. &amp; Sollid L.M. HLA-DQ molecules as affinity matrix for identification of gluten T-cell epitopes. <em>J Immunol 193<\/em>, 4497-4506, 2014.<br \/><a href=\"https:\/\/academic.oup.com\/jimmunol\/article-abstract\/193\/9\/4497\/7966450\">https:\/\/academic.oup.com\/jimmunol\/article-abstract\/193\/9\/4497\/7966450<\/a><\/li><li>Ostevik L., Gunnes G., de Souza G.A., Wien T.N. &amp; Sorby R. Nasal and ocular amyloidosis in a 15 year-old horse. <em>Acta Vet Scand 56, <\/em><br \/><a href=\"https:\/\/link.springer.com\/article\/10.1186\/s13028-014-0050-6\">https:\/\/link.springer.com\/article\/10.1186\/s13028-014-0050-6<\/a><\/li><li>Ostevik L., de Souza G.A., Wien T.N., Gunnes G. &amp; Sorby R. Characterization of amyloid in equine recurrent uveitis as AA amyloid. <em>J Comp Pathol 151<\/em>, 228-233<em>, <\/em><br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S0021997514000632\">https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S0021997514000632<\/a><\/li><li>Tutturen A.E.V., Fleckenstein B. &amp; de Souza, G.A. Assessing the citrulinome in rheumatoid arthritis synovial fluid with and without enrichment of citrullinated peptides. <em>J Proteom Res. 13<\/em>, 2867-2873, 2014.<br \/><a href=\"https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/pr500030x\">https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/pr500030x<\/a><\/li><li>Rodrigues T., Gerhardt E., Oliveira M., Chubatsu L., Pedrosa F., Souza E., de Souza G.A., Muller-Santos M. &amp; Huergo L.F. Search for novel targets of the PII signal transduction protein in Bacteria identifies the BCCP component of acetyl-CoA carboxylase as a PII binding partner. <em>Mol Microbiol 91,<\/em> 751-761, 2014.<br \/><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/full\/10.1111\/mmi.12493\">https:\/\/onlinelibrary.wiley.com\/doi\/full\/10.1111\/mmi.12493<\/a><\/li><li>Koehler C., Arntzen M.\u00d8., de Souza G.A. &amp; Thiede B. An approach for triplex-isobaric peptide termini labeling (Triplex-IPTL). <em>Anal Chem 85<\/em>, 2478-2485, 2013.<br \/><a href=\"https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/ac3035508\">https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/ac3035508<\/a><br \/><br \/><\/li><li>Tomazella G.G., Risberg K., Mylvaganam H., Lindemann P.C., Thiede B., de Souza G.A. &amp; Wiker H.G. Proteomic analysis of a multi-resistant clinical <em>Escherichia coli<\/em> isolate of unknown genomic background. <em>J Proteomics<\/em> <em>75<\/em>, 1830-1837, 2012.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S1874391911007056\">https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S1874391911007056<\/a><\/li><li>de Souza G.A., Leversen N.A., M\u00e5len H. &amp; Wiker H.G. Bacterial proteins with cleaved or uncleaved signal peptides of the general secretory pathway. <em>J Proteomics<\/em> <em>75<\/em>, 502-510, 2011.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1874391911004313\">https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1874391911004313<\/a><\/li><li>de Souza G.A. &amp; Wiker H.G. A proteomic view of mycobacteria. <em>Proteomics<\/em> <em>11<\/em>, 3118-3127, 2011.<br \/><a href=\"https:\/\/analyticalsciencejournals.onlinelibrary.wiley.com\/doi\/abs\/10.1002\/pmic.201100043\">https:\/\/analyticalsciencejournals.onlinelibrary.wiley.com\/doi\/abs\/10.1002\/pmic.201100043<\/a><\/li><li>Wiker H.G., Tomazella G.G. &amp; de Souza G.A. A quantitative view on <em> leprae<\/em> antigens by proteomics. Review, <em>J Proteomics74<\/em>, 1711-1719, 2011.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S1874391911000212\">https:\/\/www.sciencedirect.com\/science\/article\/abs\/pii\/S1874391911000212<\/a><\/li><li>M\u00e5len H., de Souza G.A., Pathak S., S\u00f8fteland T. &amp; Wiker H. Comparison of membrane proteins of <em>Mycobacterium tuberculosis<\/em> H37Rv and H37Ra strains. <em>BMC Microbiology 11<\/em>, 18, 2011.<br \/><a href=\"https:\/\/link.springer.com\/article\/10.1186\/1471-2180-11-18\">https:\/\/link.springer.com\/article\/10.1186\/1471-2180-11-18<\/a><\/li><li>de Souza G.A., Arntzen M.\u00d8., Fortuin S., Sch\u00fcrch A.C., M\u00e5len H., McEvoy C.R.E., van Soolingen D., Thiede B., Warren R.M. &amp; Wiker H.G. Proteogenomic analysis of polymorphisms and gene annotation divergences in prokaryotes using a clustered mass spectrometry-friendly database. <em>Mol Cell Proteomics 10<\/em>, M110.002527, 2011.<br \/><a href=\"https:\/\/www.mcponline.org\/article\/S1535-9476(20)31374-8\/fulltext\">https:\/\/www.mcponline.org\/article\/S1535-9476(20)31374-8\/fulltext<\/a><\/li><li>de Souza G.A., Fortuin S., Pando R.H., McEnvoy C.R.E., Koehler C.J., Thiede B., Warren R.M. &amp; Wiker H.G. Using a label-free proteomic method to identify differentially abundant proteins in closely related hypo- and hyper-virulent clinical <em>Mycobacterium tuberculosis<\/em> <em>Mol Cell Proteomics 9<\/em>, 2414-2423, 2010.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S153594762034500X\">https:\/\/www.sciencedirect.com\/science\/article\/pii\/S153594762034500X<\/a><\/li><li>de Souza G.A., Arntzen M.O. &amp; Wiker H.G. MSMSpdbb: providing protein databases of closely related organisms to improve proteomic characterization of prokaryotic microbes. <em>Bioinformatics 26<\/em>, 698-699, 2010.<br \/><a href=\"https:\/\/academic.oup.com\/bioinformatics\/article\/26\/5\/698\/212275\">https:\/\/academic.oup.com\/bioinformatics\/article\/26\/5\/698\/212275<\/a><\/li><li>Tomazella G.G., da Silva I., Thome C.H., Greene L.J., Koehler C.J., Thiede B., Wiker H.G. &amp; de Souza G.A. Analysis of detergent-insoluble and whole cell lysate fractions of resting neutrophils using high-resolution mass spectrometry. <em>J Proteome Res 9<\/em>, 2030-2036, 2010. <br \/><a href=\"https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/pr1000253\">https:\/\/pubs.acs.org\/doi\/abs\/10.1021\/pr1000253<\/a><\/li><li>M\u00e5len H., Pathak S., S\u00f8fteland T., de Souza G.A. &amp; Wiker H.G. Definition of novel cell envelope associated proteins in Triton X-114 extracts of <em>Mycobacterium tuberculosis<\/em> <em>BMC Microbiology 10<\/em>, 132, 2010.<br \/><a href=\"https:\/\/link.springer.com\/article\/10.1186\/1471-2180-10-132\">https:\/\/link.springer.com\/article\/10.1186\/1471-2180-10-132<\/a><\/li><li>de Souza G.A. &amp; Wiker H.G. Proteomic approaches to study immunity in infection. Invited as part of book chapter in Methods in Microbiology 37, Eds Dietrich Kabelitz and Stefan Kaufmann. Elsevier, 101-114, 2010.<br \/><a href=\"https:\/\/www.sciencedirect.com\/science\/chapter\/bookseries\/abs\/pii\/S058095171037005X\">https:\/\/www.sciencedirect.com\/science\/chapter\/bookseries\/abs\/pii\/S058095171037005X<\/a><\/li><li>Carpenter J.E., Jackson W., de Souza G.A., Haarr L. &amp; Grose C. Insulin degrading enzyme binds to the nonglycosylated precursor of varicella zoster virus gE protein found in the endoplasmic reticulum. <em>J Virology<\/em> <em>84<\/em>, 847-855, 2010.<br \/><a href=\"https:\/\/journals.asm.org\/doi\/full\/10.1128\/jvi.01801-09\">https:\/\/journals.asm.org\/doi\/full\/10.1128\/jvi.01801-09<\/a><\/li><li>de Souza G.A., S\u00f8fteland T., Koehler C.J., Thiede B. &amp; Wiker H.G. Validating divergent ORF annotation of the <em>Mycobacterium leprae<\/em> genome through a full translation dataset and peptide identification by tandem mass spectrometry. <em>Proteomics 9<\/em>, 3233-3243, 2009. <br \/><a href=\"https:\/\/analyticalsciencejournals.onlinelibrary.wiley.com\/doi\/abs\/10.1002\/pmic.200800955\">https:\/\/analyticalsciencejournals.onlinelibrary.wiley.com\/doi\/abs\/10.1002\/pmic.200800955<\/a><\/li><li>Tomazella G.G., da Silva I., Laure H.J., Rosa J.C., Chammas R., Wiker H.G., de Souza G.A. &amp; Greene, L.J. Proteomic analysis of total cellular proteins of human neutrophils. <em>Proteome Sci 7<\/em>, 32, 2009.<br \/><a href=\"https:\/\/link.springer.com\/article\/10.1186\/1477-5956-7-32\">https:\/\/link.springer.com\/article\/10.1186\/1477-5956-7-32<\/a><\/li><li>Pathak S., de Souza G.A., Salte T., Wiker H.G. &amp; \u00c5sjo B. HIV induces both a down-regulation of IRAK-4 that impairs TLR signalling and an up-regulation of the antibiotic peptide dermicidin in monocytic cells. <em>Scand J Immunol 70<\/em>, 264-276, 2009.<br \/><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/full\/10.1111\/j.1365-3083.2009.02299.x\">https:\/\/onlinelibrary.wiley.com\/doi\/full\/10.1111\/j.1365-3083.2009.02299.x<\/a><\/li><li>de Souza G.A. &amp; Wiker H.G. The impact of proteomic advances on bacterial gene annotation. Review, <em>Current Proteomics 6<\/em>, 84-92, 2009.<br \/><a href=\"https:\/\/www.benthamdirect.com\/content\/journals\/cp\/10.2174\/157016409788680947\">https:\/\/www.benthamdirect.com\/content\/journals\/cp\/10.2174\/157016409788680947<\/a><\/li><li>Leversen N.A., de Souza G.A., M\u00e5len H., Prasad S., Jonassen I. &amp; Wiker H.G. Evaluation of signal peptide prediction algorithms for identification of mycobacterial signal peptides using sequence data from proteomics methods. <em>Microbiology-SRG 155<\/em>, 2375-2383, 2009.<br \/><a href=\"https:\/\/www.microbiologyresearch.org\/content\/journal\/micro\/10.1099\/mic.0.025270-0\">https:\/\/www.microbiologyresearch.org\/content\/journal\/micro\/10.1099\/mic.0.025270-0<\/a><br \/><br \/><\/li><li>Schenk S., Schoenhals G.J., de Souza G.A. &amp; Mann M. A high confidence manually validated human blood plasma protein reference set. <em>BMC Med Genomics 1<\/em>, 41, 2008.<br \/><a href=\"https:\/\/link.springer.com\/article\/10.1186\/1755-8794-1-41\">https:\/\/link.springer.com\/article\/10.1186\/1755-8794-1-41<\/a><\/li><li>de Souza G.A., M\u00e5len H., S\u00f8fteland T., S\u00e6lesminde G., Prasad S., Jonassen I. &amp; Wiker H.G. High accuracy mass spectrometry analysis as a tool to verify and improve gene annotation using <em>Mycobacterium tuberculosis<\/em> as an example. <em>BMC Genomics 9<\/em>, 316, 2008.<br \/><a href=\"https:\/\/link.springer.com\/article\/10.1186\/1471-2164-9-316\">https:\/\/link.springer.com\/article\/10.1186\/1471-2164-9-316<\/a><\/li><li>M\u00e5len H., Berven F.S., S\u00f8fteland T., Arntzen M.\u00d8., D\u2019Santos C.S., de Souza G.A. &amp; Wiker H.G. Membrane and membrane-associated proteins in Triton X-114 extracts of <em>Mycobacterium bovis<\/em> BCG identified using a combination of gel-based and gel-free fractionation strategies. <em>Proteomics 8<\/em>, 1859-1870, 2008.<br \/><a href=\"https:\/\/analyticalsciencejournals.onlinelibrary.wiley.com\/doi\/abs\/10.1002\/pmic.200700528\">https:\/\/analyticalsciencejournals.onlinelibrary.wiley.com\/doi\/abs\/10.1002\/pmic.200700528<\/a><\/li><li>Zhang Y., Zhang Y., Adachi J., Olsen J.V., Shi R., de Souza G.A., Pasini E., Foster L.J., Macek B., Zougman A., Kumar C., Wisniewski J., Jun W. &amp; Mann M. MAPU: Max-Planck Unified database of organelar, cellular, tissue and body fluid proteomes. <em>Nucleic Acids Res 35<\/em>, D771-779, 2007. <br \/><a href=\"https:\/\/academic.oup.com\/nar\/article\/35\/suppl_1\/D771\/1092667\">https:\/\/academic.oup.com\/nar\/article\/35\/suppl_1\/D771\/1092667<\/a><\/li><li>de Souza G.A., Godoy L.M.F. &amp; Mann M. Identification of 491 proteins in the tear fluid proteome reveals a large number of proteases and proteases inhibitors. <em>Genome Biol 7<\/em>, R72, 2006.<br \/><a href=\"https:\/\/link.springer.com\/article\/10.1186\/gb-2006-7-8-R72\">https:\/\/link.springer.com\/article\/10.1186\/gb-2006-7-8-R72<\/a><\/li><li>Godoy L.M.F., Olsen J.V., de Souza G.A., Li G., Mortensen P. &amp; Mann M. Status of complete proteome analysis by mass spectrometry: SILAC labeled yeast as a model system. <em>Genome Biol 7<\/em>, R50, 2006.<br \/><a href=\"https:\/\/link.springer.com\/article\/10.1186\/gb-2006-7-6-r50\">https:\/\/link.springer.com\/article\/10.1186\/gb-2006-7-6-r50<\/a><\/li><li>de Souza G.A., Godoy L.M.F, Teixeira V.R., Otake H., Sabino A., Rosa J.C., Dinarte A.R., Pinheiro D.G., Silva W.A. Jr., Eberlin M.N., Chammas R. &amp; Greene L.J. Proteomic and SAGE profiling of murine melanoma progression indicates the reduction of responsible for ROS degradation. <em>Proteomics 6<\/em>, 1460-1470, 2006.<br \/><a href=\"https:\/\/analyticalsciencejournals.onlinelibrary.wiley.com\/doi\/abs\/10.1002\/pmic.200500243\">https:\/\/analyticalsciencejournals.onlinelibrary.wiley.com\/doi\/abs\/10.1002\/pmic.200500243<\/a><\/li><li>de Souza, G.A.; Oliveira, P.S.L.; Trapani, S.; Santos, A.C.O.; Rosa, J.C.; Laure, H.J.; Faca, V.M.; Correia, M.T.S.; Tavares, G.A.; Oliva, G.; Coelho, L.C.B.B. and Greene, L.J. Amino acid sequence and tertiary structure of Cratylia mollis seed lectin. <em>Glycobiology 13<\/em>, 961-972, 2003.<br \/><a href=\"https:\/\/academic.oup.com\/glycob\/article-abstract\/13\/12\/961\/638352\">https:\/\/academic.oup.com\/glycob\/article-abstract\/13\/12\/961\/638352<\/a><\/li><li>Veiga, S.S.; Feitosa, L.; Santos, V.L.P.; de Souza, G.A.; Ribeiro, A.S.; Mangili, O.C.; Porcionatto, M A; Nader, H.B.; Dietrich, C.P.; Brentani, R.R. and Gremski, W. Effect of brown spider venom on basement membrane structures. <em>Histochemical Journal<\/em> <em>32<\/em>, 397-408, 2000. <br \/><a href=\"https:\/\/link.springer.com\/article\/10.1023\/A:1004031019827\">https:\/\/link.springer.com\/article\/10.1023\/A:1004031019827<\/a><\/li><\/ol>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/details>\n\t\t\t\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t","protected":false},"excerpt":{"rendered":"<p>Dr. Gustavo de Souza Director of Bioinformatics LinkedIn Profile View Profile Dr. de Souza is the Head of Proteomics at DNA GTx who brings advanced proteomics perspective, supporting the integration of protein-level data with broader research and discovery efforts. His advisory role helps ensure cohesive, high-confidence scientific outcomes. Publications Pereira D.C.B.G., Cavalcante J.V.F., Cavalcanti L.F., [&hellip;]<\/p>\n","protected":false},"author":4,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_wpcom_ai_launchpad_first_post":false,"footnotes":"","jetpack_post_was_ever_published":true},"categories":[119],"tags":[120],"class_list":["post-44360","post","type-post","status-publish","format-standard","hentry","category-professional-profile","tag-professional-profile"],"jetpack_shortlink":"https:\/\/wp.me\/pfZTez-bxu","jetpack_featured_media_url":"","_links":{"self":[{"href":"https:\/\/dnagtx.com\/portuguese\/wp-json\/wp\/v2\/posts\/44360","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/dnagtx.com\/portuguese\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/dnagtx.com\/portuguese\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/dnagtx.com\/portuguese\/wp-json\/wp\/v2\/users\/4"}],"replies":[{"embeddable":true,"href":"https:\/\/dnagtx.com\/portuguese\/wp-json\/wp\/v2\/comments?post=44360"}],"version-history":[{"count":22,"href":"https:\/\/dnagtx.com\/portuguese\/wp-json\/wp\/v2\/posts\/44360\/revisions"}],"predecessor-version":[{"id":45129,"href":"https:\/\/dnagtx.com\/portuguese\/wp-json\/wp\/v2\/posts\/44360\/revisions\/45129"}],"wp:attachment":[{"href":"https:\/\/dnagtx.com\/portuguese\/wp-json\/wp\/v2\/media?parent=44360"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/dnagtx.com\/portuguese\/wp-json\/wp\/v2\/categories?post=44360"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/dnagtx.com\/portuguese\/wp-json\/wp\/v2\/tags?post=44360"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}